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giovedì 8 ottobre 2020

ELENCO DEI GENI INCLUSI NEI PANNELLI NGS DISPONIBILI - REV 03

 


TESSUTO CONNETIVO E OSSA 

Displasia frontometafisaria 

FLNA, MAP3K7, TAB2.

 Displasia cleidocranica (e varianti) 

FIG4, MSX2, RUNX2.

 Ectopia lentis/displasia acromicrica 

ADAMTS10, ADAMTS17, ADAMTSL2, ADAMTSL4, CBS, FBN1, LTBP2, LTBP3, SMAD4, TRIM37. 

Sindrome LMX1B (sindrome nail-patella)

LMX1B.

 Gene TP63 (ectrodattilia) 

TP63. 

Malattia esostosante/encondromatosi 

EXT1, EXT2, IDH1, IDH2, PTPN11.

Miopatia con ipermobilità articolare 

COL12A1, COL6A1, COL6A2, COL6A3, FKBP14, MYH7, RYR1, SEPN1, SGCB.

Patologia del metabolismo osteo-calcico 

ANK, AIRE, AP2S1, CASR, CDC73, CDKN1B, CLDN16, CYP24A1, GALNT3, GATA3, GCM2, GNA11, GNAS, GNL1, HSPG2, KL, MEN1, OPN, PHOSPHO1, PTH, RET, SAMD9, TBCE, TBX1, TRPM6, WNT6. 

Pseudoxantoma elastico (e varianti) 

ABCC6, ENPP1, GGCX, NT5E.

Rachitismo ereditario

 CLCN5, CYP27B1, CYP2R1, DMP1, ENPP1, FGF23, PHEX, SLC34A3, VDR.

Sindrome con cutis laxa 

ALDH18A1, ATP6V0A2, ATP6V1A, ATP6V1E1, ATP7A, EFEMP1, EFEMP2, ELN, FBLN5, GORAB, LTBP4, PTDSS1, PYCR1, RIN2.

Sindrome con fragilità ossea 

ANO5, ALPL, B3GALT6, B4GALT7, BMP1, COL1A1, COL1A2, CREB3L1, CRTAP, DKK1, EN1, FAM46A, FKBP10, FKBP14, IFITM5, LRP5, MBTPS2, P3H1, P4HB, PLOD1, PLOD2, PLOD3, PLS3, PPIB, SEC24D, SERPINF1, SERPINH1, SLC39A13, SPARC, SP7, TMEM38B, WNT1, YY1AP1.

Sindrome di Ehlers-Danlos 

ADAMTS2, AEBP1, B3GALT6, B4GALT7, C1R, C1S, CHST14, COL12A1, COL1A1, COL1A2, COL3A1, COL5A1, COL5A2, DSE, FKBP14, FLNA, PLOD1, PRDM5, SLC39A13, TNXB, ZNF469.

CUORE E VASI 

Angiomi cavernosi cerebrali

KRIT1, MGC4607, PDCD10.

Aortopatia ereditaria/sindrome con habitus marfanoide

 ACTA2, BGN, CBS, COL1A1, COL1A2, COL3A1, COL4A1, COL5A1, COL5A2, DLG4, EFEMP2, ELN, EMILIN1, FBN1, FBN2, FLNA, FOXE3, GATA5, LOX, LTBP3, MAT2A, MFAP5, MYH11, MYLK, NOTCH1, PLOD1, PRKG1, SKI, SLC2A10, SMAD2, SMAD3, SMAD4, SMS, TAB2, TBX1, TGFB1, TGFB2, TGFB3, TGFBR1, TGFBR2, UPF3B, ZDHHC9.

Cardiomiopatia o aritmia ereditaria 

ABCC9, ACTC1, ACTN2, ANKRD1, BAG3, CACNA1C, CACNB2, CASQ2, CAV3, CHRM2, CRYAB, CSRP3, DES, DOLK, DSC2, DSG2, DSP, DTNA, EMD, FHL2, GATAD1, GLA, GPD1L, ILK, JPH2, JUP, KCNE3, KCNH2, KCNJ2, KCNQ1, LAMA4, LAMP2, LDB3, LMNA, MURC, MYBPC3, MYH6, MYH7, MYL2, MYL3, MYLK2, MYOM1, MYOZ2, MYPN, NEBL, NEXN, PDLIM3, PKP2, PLN, PRDM16, PRKAG2, PTPN11, RAF1, RBM20, RYR2, SCN10A, SCN1B, SCN3B, SCN4B, SCN5A, SGCD, SNTA, TCAP, TGFB, TMEM43, TNNC1, TNNI3, TNNT2, TPM1, TRDN, TTN, TTR, VCL. 

RASopatia

 BRAF, CBL, HRAS, KRAS, LZTR1, MAP2K1, MAP2K2, MRAS, NRAS, PPP1CB, PTPN11, RAF1, RIT1, RRAS2, SHOC2, SOS1, SOS2. 

Valvulopatia cardiaca 

ARHGAP31, ARSB, BMP2, CHST3, DCHS1, GATA4, HCN4, HGD, IDUA, YY1AP1, KANSL1, MYH7, PLD1, ROBO4, SGO(L)1, SH3PXD2B, SMAD6, TBX1, TBX5.

Vasculopatia cerebrale monogenica 

CECR1, COL4A1, COL4A2, GLA, HTRA1, NOTCH3, YY1AP1.

SINDROMI ONCOLOGICHE 

Carcinoma mammella/ovaio (BRCA) 

BRCA1, BRCA2.

Carcinoma mammella (geni rari) 

ATM, CHEK2, PALB2, PTEN, STK11, TP53.

Carcinoma gastrointestinale familiare

 APC, BMPR1A, CDH1, DICER1, KIT, MLH1, MSH2, MSH6, MUTYH, NTHL1, PDGFRA, POLE, POLD1, PTEN, SMAD4, STK11.

Carcinoma ovaio (geni rari) 

BRIP1, MLH1, MSH2, MSH6, RAD51C, RAD51D.

Carcinoma renale familiare 

FH, HNF1A, HNF1B, FLCN, VHL.

Melanoma familiare

 ACD, BAP1, CDKN2A, CDK4, MITF, POT1, TERF2IP, TERT (promotore).

Neurofibromatosi 

LTZR1, NF1, NF2, SMARCB1, SPRED1.

Paraganglioma/Feocromocitoma/MEN2

 MAX, NF1, RET, SDHA, SDHAF2, SDHB, SDHC, SDHD, TMEM127, VHL.

Sindrome del nevo basocellulare

 PTCH1, PTCH2, SUFU.

NEUROSVILUPPO E ORGANI DI SENSO

Cromatinopatia 

ACTB, ACTG1, APC2, ARID1A, ARID1B, ARID2, ASXL1, ATRX, BCOR, BRD4, CDKN1C, CHD2, CHD7, CHD8, CHMP1A, CREBBP, CTCF, DNMT1, DNMT3A, DNMT3B, DPF2, EED, EHMT1, EP300, EZH2, FTO, HCFC1, HDAC4, HDAC8, HLCS, HNRNPK, HUWE1, KANSL1, KAT6B, KDM5C, KDM6A, KMT2A, KMT2B, KMT2C, KMT2D, KMT2E, MBD5, MED12, MED17, NFIX, NIPBL, NSD1, NSD1, PHF6, PHF8, POGZ, RAD21, RAI1, RAP1A, RAP1B, RPS6KA3, SALL1, SEMA3E, SETD2, SETD5, SKI, SMARCA2, SMARCA4, SMARCB1, SMARCE1, SMC1A, SMC3, SRCAP, ZBTB24.

Disturbo del neurosviluppo 

ANKRD11, ARX, ASXL1, ASXL2, ASXL3, ATAD3A, AUTS2, BRPF1, CASK, CDH15, CDH5, CDH8, CHL1, CNTN4, CNTN5, CNTN6, CNTNAP2, CTNNB1, DDX3X, DHCR7, DLG3, DOCK8, DYRK1A, EBF3, EHMT1, FGD1, FOXP1, FOXP2, GATAD2B, GDI1, GRIA3, GRIK2, GRIN2A, GRIN2B, IL1RAPL1, IQSEC2, JMJD1C, KANSL1, KAT6A, KATNAL1, KDM5C, KIAA2022, KIRREL3, MBD5, MECP2, MED12, MED13L, MED23, MEF2C, MID1, NACC1, NLGN3, NLGN4X, NRXN1, OPHN1, OTUD6B, PAK3, PCDH10, PCDH19, PPM1D, PSMD12, PTCHD1, PTEN, RAB39B, RAI1, RERE, SATB2, SETBP1, SETD5, SHANK3, SLC6A8, SLC9A6, SON, SRPX2, STAG1, STAG2, SYNGAP1, SYP, TAF1, TBCK, TBL1XR1, TBR1, TCF4, TECR, TRIO, TRIP12, TSPAN7, UBE2A, UPF3B, USP9X, YWHAE, YY1, ZDHHC9, ZEB2.

Epilessia ereditaria

 ADSL, ALDH7A1, ARHGEF, ARX, ATP1A2, ATP6AP2, CACNA1H, CACNB4, CDKL5, CHD2, CHRNA2, CHRNA4, CHRNA7, CHRNB2, CLN3, CLN5, CLN6, CLN8, CNTN4, CNTNAP2, CPA6, CRBN, CSTB, CTSD, DNAJC5, EFHC1, EPM2A, FOLR1, FOXG1, GABRA1, GABRD, GABRG2, GAMT, GATM, GOSR2, GRIN2A, GRIN2B, IER3IP1, KANSL1, KCNJ10, KCNMA1, KCNQ2, KCNQ3, KCTD7, LGI1, LIAS, MAGI2, MBD5, MECP2, MEF2C, MFSD8, NHLRC1, NRXN1, PCDH19, PLCB1, PNKP, PNPO, POLG, PPT1, PRICKLE1, PRICKLE2, PRRT2, SCARB2, SCN1A, SCN1B, SCN2A, SCN8A, SCN9A, SLC25A22, SLC2A1, SLC9A6, SPTAN1, SRPX2, ST3GAL3, STXBP1, SYN1, TBC1D24, TCF4, TMLHE, TPP1, TSC1, TSC2, TSEN2, UBE3A, ZEB2. 

Ipoacusia ereditaria (geni rari)

 ACTG1, ADCY1, ADGRV1, AIFM1, ALMS1, ATP2B2, ATP6V1B1, BDP1, BSND, CABP2, CACNA1D, CATSPER2, CCDC50, CD164, CDC14A, CDH23, CEACAM16, CIB2, CISD2, CLDN14, CLIC5, CLPP, CLRN1, COCH, COL11A1, COL11A2, COL2A1, COL4A3, COL4A4, COL4A5, COL4A6, COL9A1, COL9A2, CRYL1, CRYM, DCDC2, DFNA5, DIABLO, DIAPH1, DIAPH3, DSPP, EDN3, EDNRB, ELMOD3, EPS8, EPS8L2, ESPN, ESRRB, EYA1, EYA4, FAM65B, FGF3, FGFR1, FGFR2, FOXI1, GATA3, GIPC3, GJB2, GJB3, GJB6, GPSM2, GRHL2, GRXCR1, GRXCR2, HARS2, HGF, HOMER2, HSD17B4, ILDR1, KARS, KCNE1, KCNJ10, KCNQ1, KCNQ4, KITLG, LARS2, LHFPL5, LOC653786, LOXHD1, LOXL3, LRTOMT, MARVELD2, MCM2, MET, MiR-96, MITF, MSRB3, MTRNR1, MTTL1, MTTS1, MYH14, MYH9, MYO15A, MYO3A, MYO6, MYO7A, NARS2, NLRP3, OPA1, OSBPL2, OTOA, OTOF, OTOG, OTOGL, P2RX2, PAX3, PCDH15, PDZD7, PEX1, PEX6, PJVK, PNPT1, POLR1C, POLR1D, POU3F4, POU4F3, PRPS1, PTPRQ, RDX, ROR1, S1PR2, SERPINB6, SIX1, SIX5, SLC17A8, SLC22A4, SLC26A4, SLC26A5, SLITRK6, SMPX, SNAI2, SOX10, STRC, STRC (promotore), STRCCATSPER2, STRCP1 (pseudogene di STRC), SYNE4, TBC1D24, TBX1, TCOF1, TECTA, TECTB, TIMM8A, TJP2, TMC1, TMEM132E, TMIE, TMPRSS3, TNC, TPRN, TRIOBP, TSPEAR, TWNK, USH1C, USH1G, USH2A, WFS1, WHRN.

APPARATO GENITOURINARIO

Cistinuria 

SLC3A1, SLC7A9.

 Disturbo dello sviluppo sessuale 

AKR1C2, AKR1C4, AMH, AMHR2, AR, ARX, ATF3, BMP15, CBX2, CYB5A, CYP11B1, CYP17A1, CYP19A1, DHCR7, DHH, ESR1, ESR2, FOXL2, HOXA13, HSD17B3, HSD3B2, INSL3, LHB, LHCGR, MAMLD1, MAP3K1, NR2F2, NR3C1, NR5A1, NUP107, POR, SRD5A2, RSPO1, RXFP2, SOX9, SRY, STAR, TSPYL1, WNT4, WT1, ZFPM2, ZNRF3. 

Rene policistico autosomico dominante 

DNAJB11, GANAB, PKD1 (regione non duplicata), PKD2.

Rene policistico autosomico recessivo

DZIP1L, PKHD1.

ALTRO

Albinismo/piebaldismo isolato o sindromico 

AP3B1, AP3D1, BLM, BLOC1S3, BLOC1S6, C10orf11 (LRMDA), DTNBP1, EDN3, EDNRB, HPS1, HPS3, HPS4, HPS5, HPS6, KIT, KITLG, LYST, MITF, MLPH, MYO5A, OCA2, PAX3, RAB27A, SLC24A5, SLC45A2, SNAI2, SOX10, TYRP1, TYR. 

Iperferritinemia ereditaria/emocromatosi 

DGUOK, FTL, HAMP, HFE, HJV, SLC40A1, TFR2.

 Neuropatia delle piccole fibre 

COL6A5, GLA, SCN9A, SCN10A, SCN11A, TTR. 

Sindrome autoinfiammatoria 

LPIN2, MEFV, MVK, NLRP3, NLRP12, NOD2, PSTPIP1, TNFRSF1A.

 Sindrome autoinfiammatoria (varianti rare) 

CARD14, CCR1, CECR1, ERAP1, IL10RA, IL10RB, IL1RN, KLRC4, NLRC4, PLCG2, PSMA3, PSMB4, PSMB8, PSMB9, SH3BP2, SLC29A3, TTR.






Lo Staff / The Staff 

American Europen Medical Center 
Direttore del sito : Daniel Viennese 

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Lo Staff / The Staff

American Europen Medical Center
(americaneuropeanmedicalcenter.blogspot.com)
Direttore del sito : Daniel Viennese